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  5. Cba_g19294

Cba_g19294 (ARF16)


Aliases : ARF16

Description : ARF-type transcription factor & original description: none


Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g19294

Target Alias Description ECC score Gene Family Method Actions
AT1G30330 ARF6 auxin response factor 6 0.01 OrthoFinder output from all 47 species
AT1G77850 ARF17 auxin response factor 17 0.02 OrthoFinder output from all 47 species
AT5G20730 TIR5, MSG1,... Transcriptional factor B3 family protein /... 0.03 OrthoFinder output from all 47 species
Adi_g054963 ARF16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068596 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g089250 ARF6 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02130 ARF16 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g15630 ARF16 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12905 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24127.t1 ARF6, Aspi01Gene24127 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene55123.t1 ARF6, Aspi01Gene55123 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009155 ARF6 ARF-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0013.g013413 ARF10 ARF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0934.g093100 ARF6 ARF-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g04069 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g37448 ARF6 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g78264 ARF16 ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.20G087500.1 ARF1, Ceric.20G087500 ARF-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g36299 ARF6 ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g07492 ARF16 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08602 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g08691 ARF6 ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g09257 ARF19, IAA22, ARF11 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032251001 ARF19, IAA22, ARF11 RNA biosynthesis.transcriptional activation.B3... 0.02 OrthoFinder output from all 47 species
Gb_25507 ARF16 transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
Mp1g07070.1 ARF10 transcription factor (ARF) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016361 ARF16 ARF-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019239 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: CDS=1-3375 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023037 ARF10 ARF-type transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Sam_g12046 No alias ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28812 No alias ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR010525 ARF_dom 279 362
IPR003340 B3_DNA-bd 118 219
No external refs found!