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  5. Cba_g19057

Cba_g19057


Description : not classified & original description: none


Gene families : OG0007012 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007012_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g19057

Target Alias Description ECC score Gene Family Method Actions
Aob_g06026 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07149 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08269 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08928 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26826 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43322 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47928 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g13268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15805 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 747 776
IPR002885 Pentatricopeptide_repeat 192 217
IPR002885 Pentatricopeptide_repeat 273 297
IPR002885 Pentatricopeptide_repeat 617 641
IPR002885 Pentatricopeptide_repeat 785 808
IPR002885 Pentatricopeptide_repeat 818 842
IPR046848 E_motif 862 901
IPR002885 Pentatricopeptide_repeat 74 120
IPR002885 Pentatricopeptide_repeat 525 574
IPR002885 Pentatricopeptide_repeat 413 459
IPR002885 Pentatricopeptide_repeat 642 691
IPR002885 Pentatricopeptide_repeat 298 345
No external refs found!