1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g18316

Cba_g18316


Description : not classified & original description: none


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g18316

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00123610 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00109p00135240 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT5G50120 No alias Transducin/WD40 repeat-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g32965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17239 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10234 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g53257 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene45306.t1 Aspi01Gene45306 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G075900.1 Ceric.12G075900 not classified & original description: pacid=50601390... 0.03 OrthoFinder output from all 47 species
Ceric.13G024800.1 Ceric.13G024800 not classified & original description: pacid=50636465... 0.04 OrthoFinder output from all 47 species
Ceric.28G012600.1 Ceric.28G012600 not classified & original description: pacid=50570711... 0.02 OrthoFinder output from all 47 species
GSVIVT01007589001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01035639001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_26403 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_26404 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g56910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431396g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_107471g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g17260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55944 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g56732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005956 No alias not classified & original description: CDS=1-1941 0.02 OrthoFinder output from all 47 species
Solyc01g109120.3.1 Solyc01g109120 Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc03g111780.1.1 Solyc03g111780 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 404 447
IPR001680 WD40_repeat 366 395
IPR001680 WD40_repeat 271 306
IPR001680 WD40_repeat 317 351
No external refs found!