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  5. Cba_g18095

Cba_g18095 (EMB2729, BE1)


Aliases : EMB2729, BE1

Description : EC_2.4 glycosyltransferase & original description: none


Gene families : OG0001102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g18095
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00224220 EMB2729, BE1,... Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
AT3G20440 EMB2729, BE1 Alpha amylase family protein 0.05 OrthoFinder output from all 47 species
Aop_g05750 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23856 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07721 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08904 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04438 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01037695001 EMB2729, BE1 Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
Gb_38481 EMB2729, BE1 starch branching enzyme 0.04 OrthoFinder output from all 47 species
MA_10435727g0010 EMB2729, BE1 1,4-alpha-glucan-branching enzyme 3,... 0.03 OrthoFinder output from all 47 species
Mp3g21170.1 EMB2729, BE1 starch branching enzyme 0.04 OrthoFinder output from all 47 species
Nbi_g10952 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g06208 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44500 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g32971 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30829 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002607 SBE2.1, BE3 EC_2.4 glycosyltransferase & original description: CDS=145-2544 0.03 OrthoFinder output from all 47 species
Sam_g16543 No alias EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10197 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027838_P001 EMB2729, BE1,... starch branching enzyme 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR004193 Glyco_hydro_13_N 155 217
IPR006048 A-amylase/branching_C 838 927
IPR006047 Glyco_hydro_13_cat_dom 461 590
No external refs found!