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  5. Cba_g17771

Cba_g17771


Description : not classified & original description: none


Gene families : OG0001240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001240_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g17771

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00268210 evm_27.TU.AmTr_v1... Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AMTR_s00014p00229190 emb1692,... Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00021p00241290 WTF1, AtWTF1,... RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
AMTR_s00033p00133210 emb1692,... RNA processing.organelle machineries.RNA... 0.06 OrthoFinder output from all 47 species
AT4G01037 WTF1, AtWTF1 Ubiquitin carboxyl-terminal hydrolase family protein 0.02 OrthoFinder output from all 47 species
AT4G08940 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.02 OrthoFinder output from all 47 species
AT5G21970 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.04 OrthoFinder output from all 47 species
AT5G62990 emb1692 Ubiquitin carboxyl-terminal hydrolase family protein 0.03 OrthoFinder output from all 47 species
Ala_g12370 WTF1, AtWTF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13535 WTF1, AtWTF1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g22428 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.03 OrthoFinder output from all 47 species
Dac_g20695 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g01485 WTF1, AtWTF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_34809 WTF1, AtWTF1 WTF1 plastidial RNA basal splicing factor 0.03 OrthoFinder output from all 47 species
LOC_Os05g49610.1 WTF1, AtWTF1,... WTF1 plastidial RNA basal splicing factor 0.03 OrthoFinder output from all 47 species
LOC_Os09g29760.1 LOC_Os09g29760 Protein WHATS THIS FACTOR 1 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
MA_423098g0010 WTF1, AtWTF1 WTF1 plastidial RNA basal splicing factor 0.03 OrthoFinder output from all 47 species
Ore_g06540 WTF1, AtWTF1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g11527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo409264 No alias Protein WHATS THIS FACTOR 1 OS=Zea mays 0.05 OrthoFinder output from all 47 species
Solyc01g079430.2.1 Solyc01g079430 Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g07945 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.03 OrthoFinder output from all 47 species
Spa_g12812 WTF1, AtWTF1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g18758 WTF1, AtWTF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20353 WTF1, AtWTF1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e000591_P002 Zm00001e000591 Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Zm00001e011811_P001 emb1692, Zm00001e011811 Protein WHATS THIS FACTOR 1 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Zm00001e026570_P001 WTF1, AtWTF1,... WTF1 plastidial RNA basal splicing factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR021099 PORR_domain 2 118
No external refs found!