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  5. Cba_g17689

Cba_g17689 (ATRNL, AtRLG1, RNL)


Aliases : ATRNL, AtRLG1, RNL

Description : multifunctional tRNA ligase *(RLG1) & original description: none


Gene families : OG0002159 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002159_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g17689

Target Alias Description ECC score Gene Family Method Actions
Ala_g33662 ATRNL, AtRLG1, RNL multifunctional tRNA ligase *(RLG1) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0072.g036985 ATRNL, AtRLG1, RNL multifunctional tRNA ligase *(RLG1) & original... 0.04 OrthoFinder output from all 47 species
Ceric.19G059600.1 ATRNL, AtRLG1,... multifunctional tRNA ligase *(RLG1) & original... 0.03 OrthoFinder output from all 47 species
Ceric.19G059900.1 ATRNL, AtRLG1,... multifunctional tRNA ligase *(RLG1) & original... 0.02 OrthoFinder output from all 47 species
Dde_g07533 ATRNL, AtRLG1, RNL multifunctional tRNA ligase *(RLG1) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007535 ATRNL, AtRLG1, RNL multifunctional tRNA ligase *(RLG1) & original... 0.02 OrthoFinder output from all 47 species
Sam_g12368 No alias multifunctional tRNA ligase *(RLG1) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15639 No alias multifunctional tRNA ligase *(RLG1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26868 No alias multifunctional tRNA ligase *(RLG1) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!