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  5. Cba_g17637

Cba_g17637 (MSL5)


Aliases : MSL5

Description : mechanosensitive ion channel *(MSL) & original description: none


Gene families : OG0000689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g17637
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT1G49260 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.02 OrthoFinder output from all 47 species
Aev_g29476 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g17956 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27378 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015112001 MSL10, ATMSL10 Solute transport.channels.MSL mechanosensitive ion channel 0.02 OrthoFinder output from all 47 species
Spa_g10758 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006685 MscS_channel 688 852
No external refs found!