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  5. Cba_g17578

Cba_g17578


Description : EC_5.4 intramolecular transferase & original description: none


Gene families : OG0003044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g17578

Target Alias Description ECC score Gene Family Method Actions
AT1G68890 No alias magnesium ion binding;thiamin pyrophosphate... 0.04 OrthoFinder output from all 47 species
Adi_g056597 No alias EC_5.4 intramolecular transferase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0232.g059302 No alias multifunctional protein *(PHYLLO) involved in... 0.03 OrthoFinder output from all 47 species
Dde_g51074 No alias EC_5.4 intramolecular transferase & original description: none 0.04 OrthoFinder output from all 47 species
Mp2g20660.1 No alias isochorismate synthase. multifunctional phylloquinone... 0.02 OrthoFinder output from all 47 species
Nbi_g29600 No alias EC_5.4 intramolecular transferase & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004536 No alias EC_5.4 intramolecular transferase & original... 0.02 OrthoFinder output from all 47 species
Solyc06g071030.3.1 ICS2, ATICS2,... isochorismate synthase. isochorismate synthase 0.05 OrthoFinder output from all 47 species
Zm00001e033927_P002 ICS2, ATICS2,... isochorismate synthase. isochorismate synthase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0030976 thiamine pyrophosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR015890 Chorismate_C 355 601
IPR032264 MenD_middle 804 1038
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom 626 788
IPR000073 AB_hydrolase_1 1719 1843
IPR029065 Enolase_C-like 1433 1633
IPR011766 TPP_enzyme_TPP-bd 1088 1197
No external refs found!