Cba_g17539


Description : not classified & original description: none


Gene families : OG0003804 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003804_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g17539

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00038450 evm_27.TU.AmTr_v1... Brefeldin A-inhibited guanine nucleotide-exchange... 0.03 OrthoFinder output from all 47 species
AT5G27970 No alias ARM repeat superfamily protein 0.04 OrthoFinder output from all 47 species
Ala_g12532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G014700.1 Ceric.17G014700 not classified & original description: pacid=50618267... 0.02 OrthoFinder output from all 47 species
Dcu_g23620 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01021873001 No alias Brefeldin A-inhibited guanine nucleotide-exchange... 0.04 OrthoFinder output from all 47 species
Gb_33881 No alias Brefeldin A-inhibited guanine nucleotide-exchange... 0.03 OrthoFinder output from all 47 species
LOC_Os01g56590.1 LOC_Os01g56590 Brefeldin A-inhibited guanine nucleotide-exchange... 0.04 OrthoFinder output from all 47 species
Len_g12955 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g02462 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10436382g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_734099g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g05240.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g14084 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g40937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14636 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo443671 No alias Brefeldin A-inhibited guanine nucleotide-exchange... 0.05 OrthoFinder output from all 47 species
Solyc09g018340.2.1 Solyc09g018340 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc09g018370.4.1 Solyc09g018370 Brefeldin A-inhibited guanine nucleotide-exchange... 0.06 OrthoFinder output from all 47 species
Zm00001e019674_P001 Zm00001e019674 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019681_P002 Zm00001e019681 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
InterPro domains Description Start Stop
IPR032629 DCB_dom 3 170
IPR032817 Mon2_C 917 1187
IPR032817 Mon2_C 1500 1671
IPR032691 Mon2/Sec7/BIG1-like_HUS 233 389
IPR015403 Mon2/Sec7/BIG1-like_HDS 842 911
No external refs found!