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  5. Cba_g17433

Cba_g17433


Description : manganese/calcium cation transporter *(BICAT) & original description: none


Gene families : OG0000681 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000681_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g17433
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00129090 evm_27.TU.AmTr_v1... GDT1-like protein 5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00039p00041910 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.PAM71... 0.03 OrthoFinder output from all 47 species
AT1G64150 No alias Uncharacterized protein family (UPF0016) 0.05 OrthoFinder output from all 47 species
Aev_g07045 No alias manganese/calcium cation transporter *(BICAT) & original... 0.04 OrthoFinder output from all 47 species
Als_g00762 No alias manganese/calcium cation transporter *(BICAT) & original... 0.02 OrthoFinder output from all 47 species
Aob_g01813 No alias manganese/calcium cation transporter *(BICAT) & original... 0.05 OrthoFinder output from all 47 species
Aob_g39299 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Aop_g30835 No alias manganese/calcium cation transporter *(BICAT) & original... 0.05 OrthoFinder output from all 47 species
Ceric.31G008500.1 Ceric.31G008500 manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Cre02.g084350 No alias Solute transport.carrier-mediated transport.PAM71... 0.01 OrthoFinder output from all 47 species
Cre16.g660000 No alias Solute transport.carrier-mediated transport.PAM71... 0.01 OrthoFinder output from all 47 species
Ehy_g02423 No alias manganese/calcium cation transporter *(BICAT) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g16550 No alias manganese/calcium cation transporter *(BICAT) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01019449001 No alias Solute transport.carrier-mediated transport.PAM71... 0.07 OrthoFinder output from all 47 species
LOC_Os11g34180.1 LOC_Os11g34180 manganese/calcium cation transporter (BICAT) 0.02 OrthoFinder output from all 47 species
Len_g10003 No alias manganese/calcium cation transporter *(BICAT) & original... 0.06 OrthoFinder output from all 47 species
Lfl_g01398 No alias manganese/calcium cation transporter *(BICAT) & original... 0.05 OrthoFinder output from all 47 species
MA_9249169g0010 No alias manganese/calcium cation transporter (BICAT) 0.02 OrthoFinder output from all 47 species
Mp6g21360.1 No alias manganese/calcium cation transporter (BICAT) 0.02 OrthoFinder output from all 47 species
Msp_g11243 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g00803 No alias manganese/calcium cation transporter *(BICAT) & original... 0.06 OrthoFinder output from all 47 species
Ore_g15318 No alias manganese/calcium cation transporter *(BICAT) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g12697 No alias manganese/calcium cation transporter *(BICAT) & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017813 No alias manganese/calcium cation transporter *(BICAT) & original... 0.07 OrthoFinder output from all 47 species
Sam_g13196 No alias manganese/calcium cation transporter *(BICAT) & original... 0.05 OrthoFinder output from all 47 species
Solyc08g081770.3.1 Solyc08g081770 manganese/calcium cation transporter (BICAT) 0.04 OrthoFinder output from all 47 species
Solyc09g091240.4.1 Solyc09g091240 manganese/calcium cation transporter (BICAT) 0.02 OrthoFinder output from all 47 species
Spa_g09226 No alias manganese/calcium cation transporter *(BICAT) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e026075_P001 Zm00001e026075 manganese/calcium cation transporter (BICAT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004779 sulfate adenylyltransferase activity IEP HCCA
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001727 Gdt1 163 246
IPR001727 Gdt1 289 363
No external refs found!