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  5. AMTR_s00030p00231260

AMTR_s00030p00231260 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00030.186

Description : RNA biosynthesis.transcriptional activation.E2F/DP transcription factor


Gene families : OG_01_0001757 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001757_tree ,
OG_02_0002033 (LandPlants) Phylogenetic Tree(s): OG_02_0002033_tree ,
OG_03_0002090 (SeedPlants) Phylogenetic Tree(s): OG_03_0002090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00030p00231260
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
Mp1g02890.1 No alias E2F cell cycle interphase transcription factor.... 0.02 Archaeplastida
Pp3c2_30010V3.1 No alias E2F transcription factor 3 0.03 Archaeplastida
AT5G22220 E2FB, ATE2FB, E2F1 No description available 0.02 LandPlants
Mp1g02890.1 No alias E2F cell cycle interphase transcription factor.... 0.02 LandPlants
Pp3c2_30010V3.1 No alias E2F transcription factor 3 0.03 LandPlants
AT5G22220 E2FB, ATE2FB, E2F1 No description available 0.02 SeedPlants
Gb_10097 No alias E2F cell cycle interphase transcription factor.... 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
CC GO:0005667 transcription regulator complex IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003316 E2F_WHTH_DNA-bd_dom 138 203
No external refs found!