Cba_g17130


Description : not classified & original description: none


Gene families : OG0001104 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001104_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g17130

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00179320 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g66631... 0.03 OrthoFinder output from all 47 species
Adi_g015741 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g023647 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g089268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07294 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02569 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20063 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02060 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g09139 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0006.g009714 No alias not classified & original description: CDS=1-2130 0.03 OrthoFinder output from all 47 species
Ceric.01G061400.1 Ceric.01G061400 not classified & original description: pacid=50592672... 0.05 OrthoFinder output from all 47 species
Ceric.11G091600.1 Ceric.11G091600 not classified & original description: pacid=50596008... 0.05 OrthoFinder output from all 47 species
Ceric.16G010400.1 Ceric.16G010400 not classified & original description: pacid=50589761... 0.03 OrthoFinder output from all 47 species
Ceric.19G017900.1 Ceric.19G017900 not classified & original description: pacid=50576444... 0.03 OrthoFinder output from all 47 species
Ceric.26G072600.1 EMB2750, Ceric.26G072600 not classified & original description: pacid=50599096... 0.05 OrthoFinder output from all 47 species
Ceric.39G058300.1 Ceric.39G058300 not classified & original description: pacid=50582561... 0.02 OrthoFinder output from all 47 species
Dac_g22799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30615 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019040001 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.04 OrthoFinder output from all 47 species
Gb_32462 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.02 OrthoFinder output from all 47 species
Len_g08870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02323 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g21649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06308 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g25744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g08385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09735 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g59517 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g10079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32274 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003004 No alias not classified & original description: CDS=1-2094 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010895 No alias not classified & original description: CDS=1-2118 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017150 No alias not classified & original description: CDS=1-2094 0.04 OrthoFinder output from all 47 species
Sam_g10479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13668 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13511 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g19487 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 597 642
IPR002885 Pentatricopeptide_repeat 357 402
IPR002885 Pentatricopeptide_repeat 671 695
IPR002885 Pentatricopeptide_repeat 251 281
IPR002885 Pentatricopeptide_repeat 702 742
No external refs found!