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  5. Cba_g17110

Cba_g17110


Description : C2H2 subclass IDD transcription factor & original description: none


Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g17110

Target Alias Description ECC score Gene Family Method Actions
AT5G44160 NUC C2H2-like zinc finger protein 0.02 OrthoFinder output from all 47 species
Adi_g057486 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g12472 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g17401 MGP C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aop_g25392 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Len_g01314 NUC C2H2 subclass IDD transcription factor & original... 0.06 OrthoFinder output from all 47 species
Pir_g61845 MGP C2H2 subclass IDD transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ppi_g47248 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g34468 No alias C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc06g062670.3.1 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e003968_P002 IDD4, AtIDD4,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e010319_P001 IDD4, AtIDD4,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 55 77
No external refs found!