Cba_g17083

Description : EC_2.7 transferase transferring phosphorus-containing group & original description: none

Gene families : OG0002534 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002534_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g17083

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00113p00140210	evm_27.TU.AmTr_v1...	RNA processing.organelle machineries.ribonuclease...	0.02	OrthoFinder output from all 47 species
AT5G14580	No alias	polyribonucleotide nucleotidyltransferase, putative	0.04	OrthoFinder output from all 47 species
Adi_g010370	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Aev_g04157	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Als_g03851	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Aob_g23583	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Aop_g29988	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Ceric.25G023900.1	Ceric.25G023900	EC_2.7 transferase transferring phosphorus-containing...	0.07	OrthoFinder output from all 47 species
Dac_g14765	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.06	OrthoFinder output from all 47 species
Ehy_g04014	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
GSVIVT01032436001	No alias	RNA processing.organelle machineries.ribonuclease...	0.05	OrthoFinder output from all 47 species
LOC_Os07g07310.1	RIF10, PNP,...	polynucleotide phosphorylase (PNP)	0.01	OrthoFinder output from all 47 species
Len_g45300	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.05	OrthoFinder output from all 47 species
Lfl_g09484	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
MA_10434926g0010	No alias	Polyribonucleotide nucleotidyltransferase 2,...	0.02	OrthoFinder output from all 47 species
Mp7g12350.1	No alias	polynucleotide phosphorylase (PNP)	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016674	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Sam_g09102	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Tin_g20770	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Zm00001e015113_P001	Zm00001e015113	polynucleotide phosphorylase (PNP)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005643	nuclear pore	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006913	nucleocytoplasmic transport	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0017056	structural constituent of nuclear pore	IEP	HCCA
MF	GO:0031072	heat shock protein binding	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
BP	GO:0051169	nuclear transport	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004088	KH_dom_type_1	615	669
IPR003029	S1_domain	677	747
IPR015848	PNPase_PH_RNA-bd_bac/org-type	291	370
IPR015847	ExoRNase_PH_dom2	195	257
IPR001247	ExoRNase_PH_dom1	373	506
IPR001247	ExoRNase_PH_dom1	64	192

External Links

No external refs found!

Cba_g17083

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation