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  5. Cba_g17018

Cba_g17018


Description : not classified & original description: none


Gene families : OG0004243 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004243_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g17018
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00215160 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT4G23440 No alias Disease resistance protein (TIR-NBS class) 0.04 OrthoFinder output from all 47 species
GSVIVT01029435001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os08g38970.1 LOC_Os08g38970 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g30380.1 LOC_Os09g30380 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g25295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11688 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Solyc07g066180.2.1 Solyc07g066180 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc08g081260.1.1 Solyc08g081260 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!