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  5. Cba_g17005

Cba_g17005


Description : regulatory factor *(NCP/RCB) of plastid-encoded RNA polymerase activity & original description: none


Gene families : OG0004780 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004780_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g17005
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00167590 evm_27.TU.AmTr_v1... Thioredoxin-like fold domain-containing protein MRL7,... 0.03 OrthoFinder output from all 47 species
AT2G31840 No alias Thioredoxin superfamily protein 0.04 OrthoFinder output from all 47 species
Dcu_g10796 No alias regulatory factor *(NCP/RCB) of plastid-encoded RNA... 0.05 OrthoFinder output from all 47 species
MA_85974g0010 No alias Thioredoxin-like fold domain-containing protein MRL7,... 0.02 OrthoFinder output from all 47 species
Zm00001e019402_P001 Zm00001e019402 Thioredoxin-like fold domain-containing protein MRL7... 0.04 OrthoFinder output from all 47 species
Zm00001e027051_P004 Zm00001e027051 Thioredoxin-like fold domain-containing protein MRL7L... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!