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  5. Cba_g16426

Cba_g16426 (AGO1)


Aliases : AGO1

Description : not classified & original description: none


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cba_g16426

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00269950 PNH, AGO10, ZLL,... Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
AMTR_s00058p00069070 AGO7, ZIP,... Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
AMTR_s00083p00065730 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G31290 AGO3 ARGONAUTE 3 0.03 OrthoFinder output from all 47 species
AT2G27040 AGO4, OCP11 Argonaute family protein 0.02 OrthoFinder output from all 47 species
Aop_g05330 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.05 OrthoFinder output from all 47 species
Aspi01Gene19810.t1 AGO7, ZIP,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23299.t1 AGO7, ZIP,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28463.t2 Aspi01Gene28463 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0460.g072055 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Dac_g05113 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50313 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
GSVIVT01015464001 PNH, AGO10, ZLL Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
GSVIVT01018054001 PNH, AGO10, ZLL Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
GSVIVT01031430001 AGO5 Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
LOC_Os04g47870.1 AGO1, LOC_Os04g47870 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
LOC_Os06g51310.2 AGO1, LOC_Os06g51310 RIS-Complex miRNA recruiting factor (AGO1) 0.06 OrthoFinder output from all 47 species
LOC_Os07g28850.1 AGO1, LOC_Os07g28850 Protein argonaute 18 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_123150g0010 AGO7, ZIP siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.02 OrthoFinder output from all 47 species
MA_594g0010 PNH, AGO10, ZLL Protein argonaute PNH1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp6g20400.1 AGO4, OCP11 siRNA-integrating factor (AGO) 0.01 OrthoFinder output from all 47 species
Nbi_g07722 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.04 OrthoFinder output from all 47 species
Solyc01g010970.3.1 AGO7, ZIP, Solyc01g010970 Protein argonaute 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc07g049500.3.1 AGO6, Solyc07g049500 siRNA-integrating factor (AGO) 0.02 OrthoFinder output from all 47 species
Solyc09g082830.4.1 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.05 OrthoFinder output from all 47 species
Tin_g14929 AGO9 siRNA-integraTing factor *(AGO) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e037347_P002 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species
Zm00001e041497_P005 PNH, AGO10, ZLL,... Protein argonaute MEL1 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003165 Piwi 4 247
No external refs found!