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  5. Cba_g16424

Cba_g16424


Description : RING-H2-class CTL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000374 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g16424

Target Alias Description ECC score Gene Family Method Actions
AT1G17970 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g52753 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aob_g02207 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aob_g05319 No alias regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... 0.03 OrthoFinder output from all 47 species
LOC_Os04g51400.2 LOC_Os04g51400 E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os05g48970.1 LOC_Os05g48970 Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... 0.04 OrthoFinder output from all 47 species
Len_g01897 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Len_g20475 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
MA_44267g0010 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.04 OrthoFinder output from all 47 species
Pir_g09720 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Pnu_g06245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g014070.2.1 Solyc12g014070 Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... 0.04 OrthoFinder output from all 47 species
Solyc12g040360.2.1 Solyc12g040360 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc12g088740.2.1 Solyc12g088740 Probable E3 ubiquitin-protein ligase RHG1A... 0.02 OrthoFinder output from all 47 species
Solyc12g096420.2.1 Solyc12g096420 Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 617 659
No external refs found!