1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g16355

Cba_g16355


Description : not classified & original description: none


Gene families : OG0000090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g16355
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00210890 evm_27.TU.AmTr_v1... Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT4G08570 No alias Heavy metal transport/detoxification superfamily protein 0.02 OrthoFinder output from all 47 species
Aob_g24017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g71055 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene59197.t1 Aspi01Gene59197 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_05090 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
Lfl_g08844 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g40032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_54284g0010 No alias Heavy metal-associated isoprenylated plant protein 23... 0.03 OrthoFinder output from all 47 species
Mp2g12450.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp5g20370.1 No alias copper chaperone (CCH) 0.05 OrthoFinder output from all 47 species
Pir_g44513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001743 No alias not classified & original description: CDS=1-801 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
CC GO:0070652 HAUS complex IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 23 76
No external refs found!