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  5. Cba_g16354

Cba_g16354


Description : not classified & original description: none


Gene families : OG0001264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g16354

Target Alias Description ECC score Gene Family Method Actions
Ala_g24699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g25729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007864 No alias not classified & original description: CDS=1-924 0.03 OrthoFinder output from all 47 species
Cba_g24212 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.1Z218900.1 Ceric.1Z218900 not classified & original description: pacid=50637330... 0.04 OrthoFinder output from all 47 species
Ehy_g12176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01169 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09598 No alias PIP/PIPL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 302 331
IPR002885 Pentatricopeptide_repeat 372 392
IPR002885 Pentatricopeptide_repeat 270 296
IPR002885 Pentatricopeptide_repeat 203 242
IPR002885 Pentatricopeptide_repeat 151 199
IPR002885 Pentatricopeptide_repeat 400 428
No external refs found!