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  5. Cba_g16074

Cba_g16074


Description : not classified & original description: none


Gene families : OG0000394 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000394_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g16074
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
Adi_g042499 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115133 No alias component *(FLX) of FRI-C transcription effector complex... 0.02 OrthoFinder output from all 47 species
Aob_g13309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013352001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_27238 No alias Protein FLX-like 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g15202 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03117 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00322 No alias component *(FLX) of FRI-C transcription effector complex... 0.03 OrthoFinder output from all 47 species
Pir_g11645 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g22061 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g006260.3.1 Solyc07g006260 Protein FLX-like 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc07g062110.3.1 Solyc07g062110 Protein FLX-like 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Tin_g05949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024097_P001 Zm00001e024097 Protein FLX-like 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 584 653
IPR001202 WW_dom 349 374
No external refs found!