1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g16051

Cba_g16051


Description : not classified & original description: none


Gene families : OG0001797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001797_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g16051
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AT1G01320 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G28080 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g035059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g071573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15019 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g46749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14883 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g21641 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g26135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08477 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g18068 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26369 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Azfi_s0031.g024493 No alias not classified & original description: CDS=852-6302 0.03 OrthoFinder output from all 47 species
Ceric.12G017100.1 Ceric.12G017100 not classified & original description: pacid=50600997... 0.07 OrthoFinder output from all 47 species
Dac_g23136 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g31539 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g34188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21691 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ehy_g04071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017381001 No alias Protein TSS OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01023693001 No alias Protein TSS OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01023694001 No alias Protein TSS OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os04g55230.1 LOC_Os04g55230 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 OrthoFinder output from all 47 species
LOC_Os07g23990.1 LOC_Os07g23990 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 OrthoFinder output from all 47 species
Lfl_g03522 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g38813 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10433171g0010 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.06 OrthoFinder output from all 47 species
MA_10436966g0010 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath : 111.0) 0.04 OrthoFinder output from all 47 species
Msp_g42756 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25092 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g14901 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g15877 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Pir_g56916 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Pnu_g07071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19748 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g19896 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16287 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015275 No alias not classified & original description: CDS=1-5475 0.02 OrthoFinder output from all 47 species
Sam_g03731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo10032 No alias Protein TSS OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo442478 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Solyc06g068230.4.1 Solyc06g068230 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 OrthoFinder output from all 47 species
Solyc07g006030.4.1 Solyc07g006030 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 OrthoFinder output from all 47 species
Spa_g02169 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g15741 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22658 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g47021 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50937 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55654 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56345 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e016102_P002 Zm00001e016102 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR033646 CLU-central 796 934
IPR028275 CLU_N 48 118
No external refs found!