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  5. Cba_g16029

Cba_g16029 (SNL4)


Aliases : SNL4

Description : not classified & original description: none


Gene families : OG0000547 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000547_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g16029

Target Alias Description ECC score Gene Family Method Actions
AT1G59890 SNL5 SIN3-like 5 0.04 OrthoFinder output from all 47 species
Adi_g103364 SNL4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g14388 SNL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05295 SNL4 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g27014 SNL3, ATSIN3, SIN3 component *(SNL) of histone deacetylase machineries &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene27809.t2 SNL4, Aspi01Gene27809 component *(SNL) of histone deacetylase machineries &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene32665.t1 SNL4, Aspi01Gene32665 component *(SNL) of histone deacetylase machineries &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene46934.t1 SNL3, ATSIN3,... component *(SNL) of histone deacetylase machineries &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene57592.t1 SNL5, Aspi01Gene57592 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g06817 SNL4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07499 SNL2 component *(SNL) of histone deacetylase machineries &... 0.03 OrthoFinder output from all 47 species
Dcu_g18942 SNL4 component *(SNL) of histone deacetylase machineries &... 0.01 OrthoFinder output from all 47 species
GSVIVT01020136001 SNL3, ATSIN3, SIN3 Chromatin organisation.histone modifications.histone... 0.01 OrthoFinder output from all 47 species
GSVIVT01032579001 SNL2 Chromatin organisation.histone modifications.histone... 0.01 OrthoFinder output from all 47 species
Msp_g39361 SNL6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03860 SNL3, ATSIN3, SIN3 component *(SNL) of histone deacetylase machineries &... 0.02 OrthoFinder output from all 47 species
Ore_g30141 SNL2 component *(SNL) of histone deacetylase machineries &... 0.02 OrthoFinder output from all 47 species
Solyc02g067570.3.1 SNL2, Solyc02g067570 component SNL of histone deacetylase machineries 0.01 OrthoFinder output from all 47 species
Tin_g13041 SNL4 component *(SNL) of histone deacetylase machineries &... 0.02 OrthoFinder output from all 47 species
Zm00001e025644_P001 SNL4, Zm00001e025644 component SNL of histone deacetylase machineries 0.01 OrthoFinder output from all 47 species
Zm00001e040058_P001 Zm00001e040058 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003822 PAH 332 376
IPR003822 PAH 117 161
IPR003822 PAH 33 76
No external refs found!