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  5. Cba_g15947

Cba_g15947


Description : component *(CWC22) of MAC spliceosome-associated complex & original description: none


Gene families : OG0004452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g15947
Cluster HCCA: Cluster_269

Target Alias Description ECC score Gene Family Method Actions
Ceric.1Z119600.1 Ceric.1Z119600 component *(CWC22) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Cre06.g259800 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g13960 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Ehy_g09084 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Ore_g44880 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Sam_g50425 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003891 Initiation_fac_eIF4g_MI 652 758
No external refs found!