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  5. Cba_g15698

Cba_g15698 (KNAT4)


Aliases : KNAT4

Description : not classified & original description: none


Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g15698
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00026p00162850 KNAT3,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AMTR_s00045p00169620 KNAT6, KNAT6L,... RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
AT1G23380 KNAT6, KNAT6L, KNAT6S KNOTTED1-like homeobox gene 6 0.03 OrthoFinder output from all 47 species
AT4G32040 KNAT5 KNOTTED1-like homeobox gene 5 0.02 OrthoFinder output from all 47 species
AT5G25220 KNAT3 KNOTTED1-like homeobox gene 3 0.01 OrthoFinder output from all 47 species
Ala_g13443 KNAT3 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13096 BUM1, SHL, STM,... BEL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06255 KNAT4 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009273001 BP, BP1, KNAT1 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01031241001 KNAT6, KNAT6L, KNAT6S RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
GSVIVT01035921001 KNAT3 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
Len_g50763 KNAT3 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19225 KNAT3 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c6_1550V3.1 KNAT4, Pp3c6_1550 KNOTTED1-like homeobox gene 3 0.01 OrthoFinder output from all 47 species
Ppi_g10499 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16367 KNAT3 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g005090.4.1 KNAT6, KNAT6L,... transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
Solyc08g041820.3.1 KNAT3, Solyc08g041820 transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
Spa_g29512 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011538_P001 BP, BP1, KNAT1,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
Zm00001e027562_P001 KNAT6, KNAT6L,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
Zm00001e039044_P001 KNAT7, IXR11,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005540 KNOX1 69 102
No external refs found!