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  5. Cba_g15495

Cba_g15495 (WTF1, AtWTF1)


Aliases : WTF1, AtWTF1

Description : not classified & original description: none


Gene families : OG0001240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001240_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g15495

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00229190 emb1692,... Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT4G08940 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.03 OrthoFinder output from all 47 species
Als_g00882 WTF1, AtWTF1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0002.g001257 WTF1, AtWTF1 not classified & original description: CDS=164-1432 0.03 OrthoFinder output from all 47 species
Azfi_s0024.g020376 WTF1, AtWTF1 not classified & original description: CDS=1-1557 0.06 OrthoFinder output from all 47 species
Azfi_s0055.g033936 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g01485 WTF1, AtWTF1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g19426 WTF1, AtWTF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g00608 WTF1, AtWTF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g10885 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.03 OrthoFinder output from all 47 species
Ore_g06540 WTF1, AtWTF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10310 WTF1, AtWTF1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g33355 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012917 WTF1, AtWTF1 not classified & original description: CDS=1-1233 0.04 OrthoFinder output from all 47 species
Sam_g35883 No alias plastidial RNA basal splicing factor *(WTF1) & original... 0.02 OrthoFinder output from all 47 species
Solyc01g079430.2.1 Solyc01g079430 Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Spa_g18758 WTF1, AtWTF1 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR021099 PORR_domain 50 376
No external refs found!