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  5. Cba_g15426

Cba_g15426


Description : psbJ/psbN-translation activator *(LPE1) & original description: none


Gene families : OG0007915 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007915_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g15426

Target Alias Description ECC score Gene Family Method Actions
Als_g20443 No alias psbJ/psbN-translation activator *(LPE1) & original... 0.03 OrthoFinder output from all 47 species
Ceric.15G067200.1 Ceric.15G067200 psbJ/psbN-translation activator *(LPE1) & original... 0.02 OrthoFinder output from all 47 species
Len_g46359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00606 No alias psbJ/psbN-translation activator *(LPE1) & original... 0.04 OrthoFinder output from all 47 species
Sam_g39178 No alias psbJ/psbN-translation activator *(LPE1) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 522 580
IPR002885 Pentatricopeptide_repeat 453 511
IPR002885 Pentatricopeptide_repeat 357 384
IPR033443 PPR_long 139 250
No external refs found!