Cba_g15338


Description : transcriptional co-regulator *(Oberon) & original description: none


Gene families : OG0000521 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000521_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g15338

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00190780 OBE2,... OBERON-like protein OS=Nicotiana benthamiana 0.03 OrthoFinder output from all 47 species
AT1G14740 No alias Protein of unknown function (DUF1423) 0.04 OrthoFinder output from all 47 species
AT3G63500 No alias Protein of unknown function (DUF1423) 0.04 OrthoFinder output from all 47 species
Adi_g026102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g098683 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g122453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04884 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Aev_g08001 OBE2 transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Als_g23885 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Aob_g21192 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Aob_g27012 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0073.g037195 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Cba_g20827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04229 OBE2 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g06398 OBE2 transcriptional co-regulator *(Oberon) & original... 0.06 OrthoFinder output from all 47 species
Dcu_g22990 No alias transcriptional co-regulator *(Oberon) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g03782 OBE2 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g07963 No alias transcriptional co-regulator *(Oberon) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g18097 OBE2 transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g27694 OBE2 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01032137001 No alias Protein OBERON 4 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os03g11890.1 LOC_Os03g11890 Protein OBERON 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g34699 No alias transcriptional co-regulator *(Oberon) & original... 0.07 OrthoFinder output from all 47 species
MA_10294074g0010 No alias no description available(sp|q10pc5|tta1_orysj : 312.0) 0.02 OrthoFinder output from all 47 species
MA_214119g0010 No alias Protein OBERON 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_8062g0010 No alias no description available(sp|q10pc5|tta1_orysj : 115.0) 0.02 OrthoFinder output from all 47 species
Msp_g40697 OBE1 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g29630 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Ore_g10796 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g16666 No alias transcriptional co-regulator *(Oberon) & original... 0.04 OrthoFinder output from all 47 species
Ore_g42475 No alias transcriptional co-regulator *(Oberon) & original... 0.05 OrthoFinder output from all 47 species
Pnu_g08364 OBE2 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g08472 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002299 No alias transcriptional co-regulator *(Oberon) & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015578 OBE2 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0097.g019443 OBE2 transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Spa_g30885 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Tin_g01081 OBE2 transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e011323_P001 OBE2, Zm00001e011323 OBERON-like protein OS=Nicotiana benthamiana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR032881 Oberon_PHD 1098 1221
IPR032535 Oberon_cc 1322 1440
No external refs found!