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  5. Lfl_g32188

Lfl_g32188


Description : not classified & original description: none


Gene families : OG0001686 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001686_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g32188

Target Alias Description ECC score Gene Family Method Actions
Als_g22347 emb1417 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g33827 emb1417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17361 emb1417 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os07g36180.2 LOC_Os07g36180 Pentatricopeptide repeat-containing protein At4g18975,... 0.05 OrthoFinder output from all 47 species
Len_g03728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09758 emb1417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06884 emb1417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07146 emb1417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0290.g027162 emb1417 not classified & original description: CDS=48-1184 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 256 284
No external refs found!