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  5. Cba_g14976

Cba_g14976


Description : not classified & original description: none


Gene families : OG0001501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001501_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g14976

Target Alias Description ECC score Gene Family Method Actions
AT1G03100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G68980 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g075176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g28648 CRM3, HCF152 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09008 CRM3, HCF152 plastidial transcript stability factor *(HCF152) &... 0.03 OrthoFinder output from all 47 species
Aop_g09800 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_34245 No alias Pentatricopeptide repeat-containing protein At1g03100,... 0.03 OrthoFinder output from all 47 species
Gb_34895 No alias Pentatricopeptide repeat-containing protein At1g69290... 0.03 OrthoFinder output from all 47 species
LOC_Os07g31310.1 LOC_Os07g31310 Pentatricopeptide repeat-containing protein At4g17616... 0.02 OrthoFinder output from all 47 species
LOC_Os10g28665.1 LOC_Os10g28665 Pentatricopeptide repeat-containing protein At1g03100,... 0.02 OrthoFinder output from all 47 species
MA_84938g0010 CRM3, HCF152 HCF152 plastidial RNA transcript stability factor 0.03 OrthoFinder output from all 47 species
MA_90791g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Ppi_g10279 CRM3, HCF152 plastidial transcript stability factor *(HCF152) &... 0.03 OrthoFinder output from all 47 species
Zm00001e019596_P001 Zm00001e019596 Pentatricopeptide repeat-containing protein At1g69290... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 466 522
No external refs found!