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  5. Cba_g14356

Cba_g14356


Description : not classified & original description: none


Gene families : OG0000954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000954_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g14356

Target Alias Description ECC score Gene Family Method Actions
AT3G05430 No alias Tudor/PWWP/MBT superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g017529 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060541 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17586 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g64510 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020685.51 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g22737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20092 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01016344001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01031118001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01032455001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_40891 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g38810.1 LOC_Os05g38810 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g38053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434021g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g43747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16152 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g28169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05139 No alias N-methyltransferase component *(ATX3/4/5) of COMPASS... 0.04 OrthoFinder output from all 47 species
Pir_g06451 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g02419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56829 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g099360.3.1 Solyc01g099360 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g11186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11853 No alias N-methyltransferase component *(ATX3/4/5) of COMPASS... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 247 330
No external refs found!