Cba_g14176


Description : not classified & original description: none


Gene families : OG0001104 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001104_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g14176

Target Alias Description ECC score Gene Family Method Actions
Adi_g089268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117048 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20063 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09139 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.01G061400.1 Ceric.01G061400 not classified & original description: pacid=50592672... 0.05 OrthoFinder output from all 47 species
Ceric.03G036200.1 Ceric.03G036200 not classified & original description: pacid=50571952... 0.05 OrthoFinder output from all 47 species
Ceric.11G091600.1 Ceric.11G091600 not classified & original description: pacid=50596008... 0.03 OrthoFinder output from all 47 species
Ceric.19G017900.1 Ceric.19G017900 not classified & original description: pacid=50576444... 0.03 OrthoFinder output from all 47 species
Ceric.26G072600.1 EMB2750, Ceric.26G072600 not classified & original description: pacid=50599096... 0.06 OrthoFinder output from all 47 species
Ceric.39G058300.1 Ceric.39G058300 not classified & original description: pacid=50582561... 0.03 OrthoFinder output from all 47 species
Dde_g09775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019040001 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.02 OrthoFinder output from all 47 species
Len_g08870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06308 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15128 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g17969 CRM3, HCF152 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32274 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003004 No alias not classified & original description: CDS=1-2094 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017150 No alias not classified & original description: CDS=1-2094 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017180 CRM3, HCF152 not classified & original description: CDS=1-2193 0.03 OrthoFinder output from all 47 species
Tin_g13511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19487 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e016802_P001 Zm00001e016802 Pentatricopeptide repeat-containing protein At5g66631... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
InterPro domains Description Start Stop
IPR033443 PPR_long 505 675
IPR002885 Pentatricopeptide_repeat 247 292
IPR002885 Pentatricopeptide_repeat 173 222
No external refs found!