Cba_g14041

Description : group-II intron splicing RNA helicase *(ISE2) & original description: none

Gene families : OG0006537 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006537_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g14041

Target	Alias	Description	ECC score	Gene Family Method
Adi_g057728	No alias	group-II intron splicing RNA helicase *(ISE2) & original...	0.03	OrthoFinder output from all 47 species
Aev_g02605	No alias	group-II intron splicing RNA helicase *(ISE2) & original...	0.03	OrthoFinder output from all 47 species
Ala_g09027	No alias	group-II intron splicing RNA helicase *(ISE2) & original...	0.05	OrthoFinder output from all 47 species
Als_g14708	No alias	group-II intron splicing RNA helicase *(ISE2) & original...	0.03	OrthoFinder output from all 47 species
Aop_g26389	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aop_g27041	ISE2, PDE317, EMB25	group-II intron splicing RNA helicase *(ISE2) & original...	0.06	OrthoFinder output from all 47 species
Ceric.25G043200.1	Ceric.25G043200	group-II intron splicing RNA helicase *(ISE2) & original...	0.03	OrthoFinder output from all 47 species
Dac_g01060	No alias	group-II intron splicing RNA helicase *(ISE2) & original...	0.03	OrthoFinder output from all 47 species
Dde_g09943	ISE2, PDE317, EMB25	group-II intron splicing RNA helicase *(ISE2) & original...	0.03	OrthoFinder output from all 47 species
Dde_g24661	No alias	group-II intron splicing RNA helicase *(ISE2) & original...	0.03	OrthoFinder output from all 47 species
Gb_15475	No alias	RNA helicase (ISE2)	0.04	OrthoFinder output from all 47 species
Msp_g14223	No alias	splicing factor *(CFM9) & original description: none	0.05	OrthoFinder output from all 47 species
Msp_g43117	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g06510	No alias	group-II intron splicing RNA helicase *(ISE2) & original...	0.03	OrthoFinder output from all 47 species
Ppi_g17735	No alias	group-II intron splicing RNA helicase *(ISE2) & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0105.g020195	No alias	group-II intron splicing RNA helicase *(ISE2) & original...	0.03	OrthoFinder output from all 47 species
Sam_g17468	No alias	group-II intron splicing RNA helicase *(ISE2) & original...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	761	902
IPR012961	Ski2/MTR4_C	1476	1601

External Links

No external refs found!

Cba_g14041

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation