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  5. Cba_g13914

Cba_g13914


Description : E3 ubiquitin ligase *(DRR1) & original description: none


Gene families : OG0001028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g13914

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00183390 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
Aspi01Gene58214.t1 Aspi01Gene58214 E3 ubiquitin ligase *(DRR1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014737001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
LOC_Os05g08610.1 LOC_Os05g08610 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_10434706g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e016704_P001 Zm00001e016704 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 402 443
No external refs found!