1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00002p00252340

AMTR_s00002p00252340 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.368

Description : Disease resistance protein RPS2 OS=Arabidopsis thaliana


Gene families : OG_01_0000053 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000053_tree ,
OG_02_0000018 (LandPlants) Phylogenetic Tree(s): OG_02_0000018_tree ,
OG_03_0000005 (SeedPlants) Phylogenetic Tree(s): OG_03_0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00252340
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00238210 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g14610... 0.03 Archaeplastida
AMTR_s00032p00050560 evm_27.TU.AmTr_v1... Putative disease resistance protein At5g05400... 0.03 Archaeplastida
AMTR_s00062p00146080 evm_27.TU.AmTr_v1... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00215p00020550 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AT3G15700 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
AT5G63020 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
GSVIVT01020278001 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana 0.01 Archaeplastida
Gb_15875 No alias Putative disease resistance protein At4g10780... 0.02 Archaeplastida
LOC_Os09g14060.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10322161g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10436071g0010 No alias Probable disease resistance protein At4g27220... 0.02 Archaeplastida
MA_10436599g0010 No alias Disease resistance protein RFL1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_175083g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_7954986g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8348g0030 No alias Probable disease resistance protein At1g61180... 0.01 Archaeplastida
Solyc02g037540.3.1 No alias Probable disease resistance protein At4g27220... 0.02 Archaeplastida
Solyc06g048910.2.1 No alias Disease resistance protein At4g27190 OS=Arabidopsis... 0.03 Archaeplastida
Solyc11g007790.1.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
AMTR_s00005p00238210 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g14610... 0.03 LandPlants
AMTR_s00032p00050560 evm_27.TU.AmTr_v1... Putative disease resistance protein At5g05400... 0.03 LandPlants
AMTR_s00215p00020550 evm_27.TU.AmTr_v1... No description available 0.01 LandPlants
GSVIVT01017264001 No alias No description available 0.01 LandPlants
GSVIVT01020278001 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana 0.01 LandPlants
Gb_12859 No alias Probable disease resistance protein At4g27220... 0.02 LandPlants
Gb_15875 No alias Putative disease resistance protein At4g10780... 0.02 LandPlants
Gb_18201 No alias Probable disease resistance protein At1g61180... 0.02 LandPlants
Gb_22529 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 LandPlants
LOC_Os09g14060.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 LandPlants
MA_10322161g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_10436071g0010 No alias Probable disease resistance protein At4g27220... 0.02 LandPlants
MA_125257g0010 No alias Probable disease resistance protein At4g27220... 0.02 LandPlants
MA_8348g0030 No alias Probable disease resistance protein At1g61180... 0.01 LandPlants
MA_90078g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.02 LandPlants
Pp3c3_38130V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.01 LandPlants
Solyc06g048910.2.1 No alias Disease resistance protein At4g27190 OS=Arabidopsis... 0.02 LandPlants
Solyc11g007790.1.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 LandPlants
AMTR_s00163p00079200 evm_27.TU.AmTr_v1... Disease resistance protein RPS5 OS=Arabidopsis thaliana 0.03 SeedPlants
AMTR_s00215p00020550 evm_27.TU.AmTr_v1... No description available 0.01 SeedPlants
GSVIVT01017264001 No alias No description available 0.01 SeedPlants
GSVIVT01020278001 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana 0.01 SeedPlants
MA_10274199g0010 No alias Disease resistance protein RFL1 OS=Arabidopsis thaliana... 0.01 SeedPlants
MA_10436071g0010 No alias Probable disease resistance protein At4g27220... 0.02 SeedPlants
MA_125257g0010 No alias Probable disease resistance protein At4g27220... 0.01 SeedPlants
MA_90078g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002182 NB-ARC 159 372
IPR001611 Leu-rich_rpt 537 560
No external refs found!