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  5. Cba_g13496

Cba_g13496 (RAD4, ATRAD4)


Aliases : RAD4, ATRAD4

Description : DNA repair protein *(XPC) & original description: none


Gene families : OG0004861 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004861_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g13496

Target Alias Description ECC score Gene Family Method Actions
Als_g16656 RAD4, ATRAD4 DNA repair protein *(XPC) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05355 RAD4, ATRAD4 DNA repair protein *(XPC) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15701.t1 RAD4, ATRAD4,... DNA repair protein *(XPC) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0132.g049198 RAD4, ATRAD4 DNA repair protein *(XPC) & original description: CDS=51-3317 0.02 OrthoFinder output from all 47 species
Pir_g19479 RAD4, ATRAD4 DNA repair protein *(XPC) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR018325 Rad4/PNGase_transGLS-fold 595 728
IPR018328 Rad4_beta-hairpin_dom3 902 974
IPR018326 Rad4_beta-hairpin_dom1 778 827
IPR002931 Transglutaminase-like 328 371
IPR018327 BHD_2 831 895
No external refs found!