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  5. Cba_g13278

Cba_g13278 (CYCA1;1)


Aliases : CYCA1;1

Description : regulatory protein *(TAM) involved in metaphase to anaphase transition & original description: none


Gene families : OG0001097 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001097_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g13278

Target Alias Description ECC score Gene Family Method Actions
AT5G11300 CYC3B, CYCA2;2, CYC2BAT mitotic-like cyclin 3B from Arabidopsis 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000076.67 CYCA1;1 Cyclin-A2-1 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
LOC_Os01g13260.1 CYCA1;1, LOC_Os01g13260 cyclin (CYCA) 0.02 OrthoFinder output from all 47 species
LOC_Os03g41100.1 CYCA3;1, LOC_Os03g41100 cyclin (CYCA) 0.02 OrthoFinder output from all 47 species
Lfl_g27435 CYCA1;1 regulatory protein *(CYCA) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Zm00001e005138_P001 CYCA3;1, Zm00001e005138 cyclin (CYCA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 369 491
IPR006671 Cyclin_N 240 366
No external refs found!