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  5. Cba_g13050

Cba_g13050


Description : regulatory protein *(UBA1/2) of UBP1 activity & original description: none


Gene families : OG0000537 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000537_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g13050

Target Alias Description ECC score Gene Family Method Actions
Adi_g059176 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.02 OrthoFinder output from all 47 species
Als_g07246 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species
Als_g15755 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species
Ceric.25G031800.1 Ceric.25G031800 regulatory protein *(UBA1/2) of UBP1 activity & original... 0.02 OrthoFinder output from all 47 species
Dac_g38121 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g07696 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species
Ore_g11270 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015184 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.02 OrthoFinder output from all 47 species
Sam_g16811 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species
Sam_g16812 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species
Tin_g02739 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 74 140
IPR000504 RRM_dom 165 231
No external refs found!