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  5. Cba_g12487

Cba_g12487


Description : not classified & original description: none


Gene families : OG0002308 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002308_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g12487
Cluster HCCA: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
Ala_g07943 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g09802 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os10g28380.1 LOC_Os10g28380 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014538 No alias not classified & original description: CDS=228-1013 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009986 cell surface IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR010423 Pvs25/Psv28_EGF 79 113
IPR013032 EGF-like_CS 163 185
IPR013032 EGF-like_CS 16 38
No external refs found!