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  5. Cba_g12444

Cba_g12444 (GTE6)


Aliases : GTE6

Description : transcriptional co-activator *(BET/GTE) & original description: none


Gene families : OG0000177 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000177_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g12444
Cluster HCCA: Cluster_299

Target Alias Description ECC score Gene Family Method Actions
Aop_g02139 GTE1, GTE01, IMB1 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g01035 GTE6 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os04g53170.1 GTE7, LOC_Os04g53170 transcriptional co-activator (BET/GTE) 0.04 OrthoFinder output from all 47 species
Ore_g02750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17411 GTE8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28906 GTE8 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g02552 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Sam_g15796 No alias transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Sam_g28433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g091660.3.1 GTE7, Solyc02g091660 transcriptional co-activator (BET/GTE) 0.04 OrthoFinder output from all 47 species
Zm00001e006897_P002 GTE7, Zm00001e006897 transcriptional co-activator (BET/GTE) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001487 Bromodomain 115 200
IPR027353 NET_dom 280 341
No external refs found!