Cba_g12121


Description : not classified & original description: none


Gene families : OG0001027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g12121
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00238480 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G09000 No alias proline-rich family protein 0.02 OrthoFinder output from all 47 species
Ala_g02339 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g01872 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22548 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g30466 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G051000.1 Ceric.11G051000 not classified & original description: pacid=50595070... 0.09 OrthoFinder output from all 47 species
Dac_g31593 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g34650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39903 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05047 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13190 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032844001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_23581 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Lfl_g01969 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14591 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42334 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g38965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA

No InterPro domains available for this sequence

No external refs found!