Cba_g12027 (EMB2780)

Aliases : EMB2780

Description : not classified & original description: none

Gene families : OG0002006 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002006_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g12027

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0008.g011315	ATREV3, REV3	not classified & original description: CDS=841-2013	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020539.8	EMB2780	DNA polymerase delta catalytic subunit OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
Pp3c10_11570V3.1	EMB2780, Pp3c10_11570	DNA binding;nucleotide binding;nucleic acid...	0.02	OrthoFinder output from all 47 species
Pp3c10_25280V3.1	EMB2780, Pp3c10_25280	DNA binding;nucleotide binding;nucleic acid...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR025687	Znf-C4pol	1077	1151
IPR006133	DNA-dir_DNA_pol_B_exonuc	42	190
IPR006133	DNA-dir_DNA_pol_B_exonuc	360	518
IPR006134	DNA-dir_DNA_pol_B_multi_dom	586	1032

External Links

No external refs found!