Cba_g11994


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g11994
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Adi_g004438 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g006433 PHL1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g025472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13064 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g12175 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g01763 No alias GARP subgroup PHL transcription factor & original... 0.07 OrthoFinder output from all 47 species
Aob_g29353 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g30442 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g05983 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene33756.t1 Aspi01Gene33756 transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11144 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15047 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g17436 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g39820 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g04920 KAN2 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001376001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
LOC_Os05g40960.1 LOC_Os05g40960 G2-like GARP transcription factor 0.06 OrthoFinder output from all 47 species
LOC_Os08g25820.2 LOC_Os08g25820 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Len_g21596 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Len_g46829 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g02992 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Msp_g24104 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.08 OrthoFinder output from all 47 species
Pir_g55133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g22170 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ppi_g39066 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015782 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc09g005370.1.1 Solyc09g005370 G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
Spa_g04247 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Spa_g09882 PHL1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g22319 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Spa_g51060 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Spa_g56754 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 53 103
IPR025756 Myb_CC_LHEQLE 136 182
No external refs found!