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  5. Cba_g11979

Cba_g11979 (SPA4)


Aliases : SPA4

Description : regulatory component *(SPA) of COP1-SPA light signal transduction E3 ubiquitin ligase complex & original description: none


Gene families : OG0000638 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000638_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g11979

Target Alias Description ECC score Gene Family Method Actions
Adi_g015282 SPA3 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Ala_g07511 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.04 OrthoFinder output from all 47 species
Aob_g16328 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
Cba_g12823 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Dde_g01612 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.03 OrthoFinder output from all 47 species
Dde_g09629 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.04 OrthoFinder output from all 47 species
Nbi_g06333 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
Nbi_g11726 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.06 OrthoFinder output from all 47 species
Nbi_g21337 SPA4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26130 SPA3 regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
Pir_g05451 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.05 OrthoFinder output from all 47 species
Ppi_g07004 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 959 998
No external refs found!