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  5. Cba_g11855

Cba_g11855 (TPX2)


Aliases : TPX2

Description : prospindle assembly factor *(TPX2) & original description: none


Gene families : OG0002013 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002013_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g11855

Target Alias Description ECC score Gene Family Method Actions
AT4G11990 No alias Cell cycle regulated microtubule associated protein 0.03 OrthoFinder output from all 47 species
AT4G22860 No alias Cell cycle regulated microtubule associated protein 0.02 OrthoFinder output from all 47 species
Adi_g084155 TPX2 prospindle assembly factor *(TPX2) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46692 TPX2 prospindle assembly factor *(TPX2) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35358 TPX2 prospindle assembly factor *(TPX2) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000842 TPX2 prospindle assembly factor *(TPX2) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015155 TPX2 not classified & original description: CDS=1-2103 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR027330 TPX2_central_dom 361 530
IPR027330 TPX2_central_dom 468 558
No external refs found!