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  5. Cba_g11558

Cba_g11558


Description : E3 ubiquitin ligase *(PIRE) & original description: none


Gene families : OG0001463 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001463_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g11558

Target Alias Description ECC score Gene Family Method Actions
Adi_g040517 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g57349 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0094.g043391 No alias E3 ubiquitin ligase *(PIRE) & original description: CDS=158-1579 0.03 OrthoFinder output from all 47 species
Ceric.10G029100.1 Ceric.10G029100 E3 ubiquitin ligase *(PIRE) & original description:... 0.03 OrthoFinder output from all 47 species
LOC_Os02g37030.1 LOC_Os02g37030 RING-C2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Mp5g21610.1 No alias RING-C2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MpVg01180.1 No alias No annotation 0.02 OrthoFinder output from all 47 species
Nbi_g00816 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40763 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16931 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50184 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!