Cba_g11293

Description : component *(RINGLET/RLT) of ISWI chromatin remodeling complex & original description: none

Gene families : OG0001590 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001590_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g11293
Cluster	HCCA: Cluster_293

Target	Alias	Description	ECC score	Gene Family Method
AT4G12750	No alias	Homeodomain-like transcriptional regulator	0.03	OrthoFinder output from all 47 species
Aop_g09051	HB-1	component *(RINGLET/RLT) of ISWI chromatin remodeling...	0.04	OrthoFinder output from all 47 species
Aspi01Gene70375.t1	Aspi01Gene70375	component *(RINGLET/RLT) of ISWI chromatin remodeling...	0.02	OrthoFinder output from all 47 species
Cre03.g174500	No alias	Homeobox-DDT domain protein RLT1 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Dac_g05474	HB-1	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g30736	No alias	component *(RINGLET/RLT) of ISWI chromatin remodeling...	0.03	OrthoFinder output from all 47 species
LOC_Os07g42750.1	LOC_Os07g42750	Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_10432531g0010	No alias	Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e006057_P001	Zm00001e006057	Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016763	pentosyltransferase activity	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR028941	WHIM2_dom	1053	1125
IPR028942	WHIM1_dom	883	921
IPR018501	DDT_dom	486	540
IPR007759	Asxl_HARE-HTH	663	731

External Links

No external refs found!