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  5. Cba_g11185

Cba_g11185 (RPL16A)


Aliases : RPL16A

Description : component *(uL5) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001936 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001936_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g11185
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00203150 RPL16A,... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
AT4G18730 RPL16B ribosomal protein L16B 0.05 OrthoFinder output from all 47 species
AT5G45775 No alias Ribosomal L5P family protein 0.04 OrthoFinder output from all 47 species
Adi_g080914 RPL16A component *(uL5) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Adi_g080915 RPL16A component *(uL5) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ala_g17681 No alias component *(uL5) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Aop_g30844 No alias component *(uL5) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aop_g70327 RPL16A component *(uL5) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0350.g066549 RPL16A component *(uL5) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.02G112300.1 RPL16A, Ceric.02G112300 component *(uL5) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020610.38 RPL16A Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 47 species
Cre01.g027000 RPL16A Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder output from all 47 species
Dac_g32571 RPL16A component *(uL5) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g08602 RPL16A component *(uL5) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Dde_g25923 RPL16A component *(uL5) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01020743001 RPL16A Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder output from all 47 species
GSVIVT01021244001 RPL16A Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder output from all 47 species
Gb_22357 RPL16A component RPL11 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os01g10820.1 RPL16A, LOC_Os01g10820 component RPL11 of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os05g11710.1 RPL16A, LOC_Os05g11710 component RPL11 of LSU proteome component 0.08 OrthoFinder output from all 47 species
LOC_Os06g35730.1 RPL16A, LOC_Os06g35730 component RPL11 of LSU proteome component 0.09 OrthoFinder output from all 47 species
MA_86694g0010 RPL16A component RPL11 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Mp2g24740.1 RPL16A component RPL11 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Mp6g18870.1 RPL16A component RPL11 of LSU proteome component 0.07 OrthoFinder output from all 47 species
Msp_g09123 No alias component *(uL5) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pp3c2_33280V3.1 RPL16A, Pp3c2_33280 ribosomal protein L16B 0.03 OrthoFinder output from all 47 species
Pp3c5_3870V3.1 RPL16A, Pp3c5_3870 Ribosomal L5P family protein 0.03 OrthoFinder output from all 47 species
Pp3c7_20160V3.1 RPL16A, Pp3c7_20160 ribosomal protein large subunit 16A 0.03 OrthoFinder output from all 47 species
Sam_g17383 No alias component *(uL5) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Smo444767 RPL16A Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Solyc02g086240.3.1 RPL16A, Solyc02g086240 component RPL11 of LSU proteome component 0.07 OrthoFinder output from all 47 species
Solyc07g055230.4.1 RPL16A, Solyc07g055230 component RPL11 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Solyc10g007980.3.1 RPL16A, Solyc10g007980 component RPL11 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Solyc12g010930.2.1 RPL16A, Solyc12g010930 component RPL11 of LSU proteome component 0.07 OrthoFinder output from all 47 species
Spa_g07232 RPL16A component *(uL5) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Spa_g07233 RPL16A component *(uL5) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Spa_g22809 No alias component *(uL5) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Spa_g25528 No alias component *(uL5) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g30816 RPL16A component *(uL5) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Tin_g02344 RPL16A component *(uL5) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Zm00001e024913_P001 RPL16A, Zm00001e024913 component RPL11 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Zm00001e026886_P003 RPL16A, Zm00001e026886 component RPL11 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Zm00001e037255_P001 RPL16A, Zm00001e037255 component RPL11 of LSU proteome component 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR031310 Ribosomal_L5_N 10 63
IPR031309 Ribosomal_L5_C 67 165
No external refs found!