Cba_g10810 (EDF4, RAV1)


Aliases : EDF4, RAV1

Description : AP2-RAV-type transcription factor *(EDF) & original description: none


Gene families : OG0000941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000941_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g10810
Cluster HCCA: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
AT1G51120 No alias AP2/B3 transcription factor family protein 0.02 OrthoFinder output from all 47 species
AT2G46870 NGA1 AP2/B3-like transcriptional factor family protein 0.03 OrthoFinder output from all 47 species
AT5G06250 No alias AP2/B3-like transcriptional factor family protein 0.04 OrthoFinder output from all 47 species
Adi_g025524 TEM1, EDF1 AP2-RAV-type transcription factor *(EDF) & original... 0.05 OrthoFinder output from all 47 species
Cba_g71540 EDF4, RAV1 AP2-RAV-type transcription factor *(EDF) & original... 0.04 OrthoFinder output from all 47 species
Dde_g25414 TEM1, EDF1 AP2-RAV-type transcription factor *(EDF) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os01g04800.1 EDF2, AtRAV2,... transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.02 OrthoFinder output from all 47 species
LOC_Os11g05740.1 LOC_Os11g05740 transcription factor (RAV/NGATHA) 0.03 OrthoFinder output from all 47 species
LOC_Os12g06080.1 LOC_Os12g06080 transcription factor (RAV/NGATHA) 0.03 OrthoFinder output from all 47 species
MA_116574g0010 EDF3 transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.02 OrthoFinder output from all 47 species
MA_20372g0020 EDF4, RAV1 transcription factor (RAV/NGATHA) 0.02 OrthoFinder output from all 47 species
MA_865117g0010 EDF4, RAV1 transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.04 OrthoFinder output from all 47 species
Ppi_g32810 EDF2, AtRAV2,... AP2-RAV-type transcription factor *(EDF) & original... 0.03 OrthoFinder output from all 47 species
Smo110104 EDF2, AtRAV2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Solyc08g013700.1.1 NGA3, Solyc08g013700 transcription factor (RAV/NGATHA) 0.05 OrthoFinder output from all 47 species
Zm00001e016956_P001 EDF2, AtRAV2,... transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 147 193
No external refs found!