Cba_g10687 (PRPL11)

Aliases : PRPL11

Description : component *(uL11c) of large plastid ribosomal-subunit proteome & original description: none

Gene families : OG0007074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007074_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g10687
Cluster	HCCA: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
AT1G32990	PRPL11	plastid ribosomal protein l11	0.02	OrthoFinder output from all 47 species
Ala_g12058	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Als_g00538	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Azfi_s0591.g078746	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Cre10.g423650	PRPL11	Protein biosynthesis.organelle translation...	0.03	OrthoFinder output from all 47 species
Dde_g08872	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Gb_12514	PRPL11	component psRPL11 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
LOC_Os03g03020.1	PRPL11, LOC_Os03g03020	component psRPL11 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Mp7g12110.1	PRPL11	component psRPL11 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Nbi_g11504	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Pir_g17849	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Pp3c12_19370V3.1	PRPL11, Pp3c12_19370	plastid ribosomal protein l11	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021434	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Zm00001e000163_P001	PRPL11, Zm00001e000163	component psRPL11 of large ribosomal subunit proteome	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
MF	GO:0016730	oxidoreductase activity, acting on iron-sulfur proteins as donors	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR020783	Ribosomal_L11_C	132	200
IPR020784	Ribosomal_L11_N	70	127

External Links

No external refs found!

Cba_g10687 (PRPL11)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation